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Dual Labeled Probes suitable for all type of qPCR instruments

Dual labeled probes used in quantitative real-time PCR systems take advantage of the 5'→3' exonuclease activity of Taq polymerase.

Dual labeled probes contain a fluorescent reporter and the appropriate quencher covalently linked to the 5′ and 3′ termini, respectively, of a custom oligo sequence which anneals with the target DNA between the PCR primers. During the extension phase of PCR, the 5'→3' exonuclease activity of Taq polymerase cleaves the fluorescent reporter from the probe. The amount of free reporter accumulates as the number of PCR cycles increases. The fluorescent signal from the free reporter is measured in real time and allows the quantification of the target sequence.

Ordering

Eurofins Genomics offers the most popular dye-quencher combinations with predefined probe pricing. More dye-quencher combinations are available from the custom oligo order page. View a list of all modifications for custom probes.

Order Probes

Or order in plates

Or order as qPCR Assay

HPLC purification included

 Pricing is located on the price list page, under modifications.

Product specifications:

  • Degenerate bases (wobbles) included
  • Multiple Dye–Quencher combinations (see below)
  • Shipped after HPLC purification
  • Quality control by OD measurement and MALDI-TOF MS
  • Delivery: lyophilized or concentration adjusted in tubes
  • Shipped in 4–5 working days
Feature Details
Synthesis scale / minimum yield guarantee1 50 nmol scale
/ 15 nmol yield
250 nmol scale
/ 25 nmol yield
1 µmol
/ 50 nmol yield
Yield [nmole]2 10 25 50
Yield [OD]2 5 8 15
Length restriction 5–40 5–40 5–40
Turnaround time 3-5 days 4-5 days 5 days +

All relevant documents are provided in your online account free of charge:

  • Oligo synthesis report
  • Quality report including MALDI-TOF MS spectra
  • Delivery note

1. The synthesis scale indicates the initial amount of 3'-bases.
2. Average yield was determined for a 20-mer; Calculation: 1 OD = 5 nmole = 30 ug; may vary for sequences with GC content >70%, >3 purine stretches, or strong secondary structures.

 

Probe Combinations

5' Reporter Abs [nm] Em [nm] Compatible 3' Quencher
Tide Quencher 1 [TQ1]
341 477 Tide Quencher 1
FAM [FAM]
495 520 TAM, BHQ1, BBQ650
Tide Quencher 2 [TQ2]
499 522 Tide Quencher 2
Oregon Green 488 [OrGre]
496 536 BHQ1
TET [5TET] 521 536 TAM, BHQ1
JOE [JOE] 520 548 BHQ1
HEX [5HEX] 535 556 BHQ1, BHQ2
Cyanine3 [Cy3] 552 570 BHQ2
Tide Fluor 3 [TF3] 560 580 Tide Quencher 3
ROX [ROX] 575 602 BHQ2
Texas Red [TxRed] 583 603 BHQ2
Cyanine3.5 [CyV] 588 604 BHQ2
Cal Fluor 560 [CalFluor560] 544 637 BHQ2
Cal Fluor 590 [CalFuor590] 569 606 BHQ2
Cal Fluor Red 610 [CalFluor610] 590 610 BHQ2
Tide Fluor 5 [TF5] 649 664 Tide Quencher 5
Cyanine5 [Cy5]
649 670 BHQ2
Cyanine5.5 [CyLB]
675 694 BHQ2

 

New qPCR Assay Option

To order a probe with a forward and reverse primer, try the new qPCR assay order page. This option conveniently combines the predefined probes with 2 primers for faster ordering. CLICK HERE to visit the qPCR assay order page.


Additional Probe Options

MGB Probes

Order MGB Probes

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LNA Probes

Order LNA Probes

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Molecular Beacons

 Order

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